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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11220343 chr11:125953133 C/T RNF26 chr11:119205237-119208023:+ 0.67 5.98 5.11E-9 Box Plot
BLCA rs11220397 chr11:126057195 A/G AASDHPPT chr11:105946228-105969437:+ 0.79 6.16 1.85E-9 Box Plot
BLCA rs11220397 chr11:126057195 A/G ARCN1 chr11:118443105-118473748:+ 0.77 6.26 1.04E-9 Box Plot
BLCA rs11220397 chr11:126057195 A/G ARHGEF12 chr11:120207623-120360645:+ 0.63 6.21 1.37E-9 Box Plot
BLCA rs11220397 chr11:126057195 A/G C11orf57 chr11:111944810-111955874:+ 0.87 6.5 2.46E-10 Box Plot
BLCA rs11220397 chr11:126057195 A/G DLAT chr11:111895538-111935114:+ 0.79 7.05 8.39E-12 Box Plot
BLCA rs11220397 chr11:126057195 A/G MLL chr11:118307205-118397538:+ 0.71 6.8 4.01E-11 Box Plot
BLCA rs11220704 chr11:126880301 C/G CHD8 chr14:21853353-21924285:- -0.38 -5.99 4.93E-9 Box Plot
BLCA rs11223354 chr11:132937682 C/T ACAD8 chr11:134123389-134135749:+ 0.83 6.51 2.38E-10 Box Plot
BLCA rs11223354 chr11:132937682 C/T C11orf57 chr11:111944810-111955874:+ 0.85 5.98 5.04E-9 Box Plot
BLCA rs11223354 chr11:132937682 C/T PPP2R1B chr11:111597632-111637151:- 1 6.94 1.69E-11 Box Plot
BLCA rs11223354 chr11:132937682 C/T TIMM8B chr11:111955524-111957522:- 0.77 6.71 7.12E-11 Box Plot
BLCA rs11225776 chr11:103279458 C/T ZBED4 chr22:50247490-50283726:+ 0.23 5.98 5.07E-9 Box Plot
BLCA rs11225777 chr11:103279459 A/G ZBED4 chr22:50247490-50283726:+ 0.23 5.98 5.07E-9 Box Plot
BLCA rs1123337 chr11:128295431 A/G FLJ44635 chrX:71364034-71381599:+ 0.35 6.1 2.64E-9 Box Plot